API
- changeo.Alignment
- changeo.Applications
- changeo.Commandline
- changeo.Distance
- changeo.Gene
- changeo.IO
- changeo.Multiprocessing
- changeo.Receptor
AIRRSchemaAIRRSchemaAAChangeoSchemaChangeoSchemaAAReceptorReceptor.d_germ_aa_endReceptor.d_germ_endReceptor.d_seq_aa_endReceptor.d_seq_endReceptor.getAIRR()Receptor.getAlleleCalls()Receptor.getAlleleNumbers()Receptor.getChangeo()Receptor.getDAllele()Receptor.getDAlleleNumber()Receptor.getDFamily()Receptor.getDGene()Receptor.getFamilyCalls()Receptor.getField()Receptor.getGeneCalls()Receptor.getJAllele()Receptor.getJAlleleNumber()Receptor.getJFamily()Receptor.getJGene()Receptor.getSeq()Receptor.getVAllele()Receptor.getVAlleleNumber()Receptor.getVFamily()Receptor.getVGene()Receptor.j_germ_aa_endReceptor.j_germ_endReceptor.j_seq_aa_endReceptor.j_seq_endReceptor.junction_endReceptor.setDict()Receptor.setField()Receptor.toDict()Receptor.v_germ_aa_end_imgtReceptor.v_germ_aa_end_vdjReceptor.v_germ_end_imgtReceptor.v_germ_end_vdjReceptor.v_seq_aa_endReceptor.v_seq_end
ReceptorDataReceptorData.sequence_idReceptorData.rev_compReceptorData.functionalReceptorData.in_frameReceptorData.stopReceptorData.mutated_invariantReceptorData.indelsReceptorData.v_frameshiftReceptorData.sequence_inputReceptorData.sequence_vdjReceptorData.sequence_imgtReceptorData.sequence_aa_inputReceptorData.sequence_aa_vdjReceptorData.sequence_aa_imgtReceptorData.junctionReceptorData.junction_aaReceptorData.junction_startReceptorData.junction_lengthReceptorData.germline_vdjReceptorData.germline_vdj_d_maskReceptorData.germline_imgtReceptorData.germline_imgt_d_maskReceptorData.germline_aa_vdjReceptorData.germline_aa_imgtReceptorData.v_callReceptorData.d_callReceptorData.j_callReceptorData.c_callReceptorData.v_seq_startReceptorData.v_seq_lengthReceptorData.v_germ_start_imgtReceptorData.v_germ_length_imgtReceptorData.v_germ_start_vdjReceptorData.v_germ_length_vdjReceptorData.v_seq_aa_startReceptorData.v_seq_aa_lengthReceptorData.v_germ_aa_start_imgtReceptorData.v_germ_aa_length_imgtReceptorData.v_germ_aa_start_vdjReceptorData.v_germ_aa_length_vdjReceptorData.np1_startReceptorData.np1_lengthReceptorData.np1_aa_startReceptorData.np1_aa_lengthReceptorData.d_seq_startReceptorData.d_seq_lengthReceptorData.d_germ_startReceptorData.d_germ_lengthReceptorData.d_seq_aa_startReceptorData.d_seq_aa_lengthReceptorData.d_germ_aa_startReceptorData.d_germ_aa_lengthReceptorData.np2_startReceptorData.np2_lengthReceptorData.np2_aa_startReceptorData.np2_aa_lengthReceptorData.j_seq_startReceptorData.j_seq_lengthReceptorData.j_germ_startReceptorData.j_germ_lengthReceptorData.j_seq_aa_startReceptorData.j_seq_aa_lengthReceptorData.j_germ_aa_startReceptorData.j_germ_aa_lengthReceptorData.v_scoreReceptorData.v_identityReceptorData.v_evalueReceptorData.v_btopReceptorData.v_cigarReceptorData.d_scoreReceptorData.d_identityReceptorData.d_evalueReceptorData.d_btopReceptorData.d_cigarReceptorData.j_scoreReceptorData.j_identityReceptorData.j_evalueReceptorData.j_btopReceptorData.j_cigarReceptorData.vdj_scoreReceptorData.fwr1_imgtReceptorData.fwr2_imgtReceptorData.fwr3_imgtReceptorData.fwr4_imgtReceptorData.cdr1_imgtReceptorData.cdr2_imgtReceptorData.cdr3_imgtReceptorData.cdr3_igblastReceptorData.fwr1_aa_imgtReceptorData.fwr2_aa_imgtReceptorData.fwr3_aa_imgtReceptorData.fwr4_aa_imgtReceptorData.cdr1_aa_imgtReceptorData.cdr2_aa_imgtReceptorData.cdr3_aa_imgtReceptorData.cdr3_igblast_aaReceptorData.n1_lengthReceptorData.n2_lengthReceptorData.p3v_lengthReceptorData.p5d_lengthReceptorData.p3d_lengthReceptorData.p5j_lengthReceptorData.d_frameReceptorData.conscountReceptorData.dupcountReceptorData.umicountReceptorData.cloneReceptorData.cellReceptorData.annotationsReceptorData.aminoacid()ReceptorData.double()ReceptorData.end_fieldsReceptorData.identity()ReceptorData.integer()ReceptorData.length_fieldsReceptorData.logical()ReceptorData.nucleotide()ReceptorData.parsersReceptorData.start_fields