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1.1.0
  • Immcantation Portal

Getting Started

  • Overview
  • Download
  • Installation
  • Data Standards

Examples

  • Using IgBLAST
  • Parsing IMGT output
  • Parsing 10X Genomics V(D)J data
  • Filtering records
  • Clustering sequences into clonal groups
  • Reconstructing germline sequences
  • IgPhyML lineage tree analysis
  • Generating MiAIRR compliant GenBank/TLS submissions

Methods

  • Clonal clustering methods
  • Reconstruction of germline sequences from alignment data

Usage Documentation

  • Commandline Usage
  • API

About

  • Release Notes
  • Contact
  • Citation
  • License
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© Copyright Kleinstein Lab, Yale University, 2021. Revision 775c6fa4.

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